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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65167066_65167117_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

65167066 - 65167117

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTCAGAGAA

5'SS Class:

weak_major

3'SS Sequence:

GCAGAAATTTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTCAACA

Flanking Amino Acid:

ILLTEKLFEVNIRFVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.4

55.2

38.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

58.8

0.2

1.1

45.6

Minor 5ss

27.1

-2.6

3.2

30.9

42.5

Minor BPS

64.1

0.44

1.5

75.89

35.2

Associated Gene:

Gene:

MAN1A1

Ensembl Gene ID:

ENSAPLG00000015044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040860

65167047 - 65248361

81315