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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65167183_65196116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65167183 - 65196116

Intron Length:

28934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTAACTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTCTTCTTAACT

Flanking Amino Acid:

LSAYYLSGEEIFRKKAVELG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

82.2

0.8

71.9

35.8

Major PPT

79.9

0.67

0.9

70.3

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

87.3

1.25

0.9

95.32

31.5

Associated Gene:

Gene:

MAN1A1

Ensembl Gene ID:

ENSAPLG00000015044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021029

65145370 - 65243451

98082

ENSAPLT00000015692

65145370 - 65248361

102992

ENSAPLT00000040860

65167047 - 65248361

81315

ENSAPLT00000029511

65154020 - 65243451

89432