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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65241264_65242043_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65241264 - 65242043

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTATACTGGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTTTTTTAATA

Flanking Amino Acid:

RTCHESYDRTSMKLGPEAFR

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

78.2

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

60.3

0.23

1.1

45.2

Minor 5ss

37.8

-1.4

2.7

44.3

36.8

Minor BPS

0.59

1.2

69.67

37.9

Associated Gene:

Gene:

MAN1A1

Ensembl Gene ID:

ENSAPLG00000015044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040860

65167047 - 65248361

81315

ENSAPLT00000029511

65154020 - 65243451

89432

ENSAPLT00000021029

65145370 - 65243451

98082

ENSAPLT00000015692

65145370 - 65248361

102992