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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65242217_65246978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65242217 - 65246978

Intron Length:

4762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTTC

5'SS Class:

strong_major

3'SS Sequence:

CATCCCTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

CCTTCCTCATCC

Flanking Amino Acid:

YRQWAWEAVEALEKHCRVDG

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

75.8

34.6

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

73.2

0.52

0.8

70.1

30.3

Minor 5ss

41.4

-1

3.3

58.9

45.9

Minor BPS

55.8

0.16

1.9

66.27

45.4

Associated Gene:

Gene:

MAN1A1

Ensembl Gene ID:

ENSAPLG00000015044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040860

65167047 - 65248361

81315

ENSAPLT00000015692

65145370 - 65248361

102992