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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65247095_65248234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65247095 - 65248234

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTAATCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATC

Flanking Amino Acid:

QQSFFLSETLKYLYLLFSDD

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.3

0.5

1.1

44.9

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

74.8

0.76

1.1

33.7

Associated Gene:

Gene:

MAN1A1

Ensembl Gene ID:

ENSAPLG00000015044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040860

65167047 - 65248361

81315

ENSAPLT00000015692

65145370 - 65248361

102992