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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65291790_65296958_F

Intron Information:

Intron Rank:

150025

Intron Class:

major

Intron Phase:

Intron Coordinates:

65291790 - 65296958

Intron Length:

5169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGCTAATAGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

81.4

32.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

79.6

0.67

0.8

77.7

31.1

Minor 5ss

39.7

-1.2

2.9

51.2

45.7

Minor BPS

45.6

-0.2

2.1

66.16

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031408

65285492 - 65297434

11943