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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65393206_65394695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65393206 - 65394695

Intron Length:

1490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GCTTTCTGAAGT

Flanking Amino Acid:

DYQEIKIQEQVQRLSVGSIP

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

76.5

0.6

0.8

69.4

36.9

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

0.3

1.8

72.98

43.9

Associated Gene:

Gene:

MCM9

Ensembl Gene ID:

ENSAPLG00000015174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038403

65388320 - 65435207

46888

ENSAPLT00000015829

65388320 - 65435052

46733