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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65422436_65424080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65422436 - 65424080

Intron Length:

1645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

ATGTTCATATTT

Flanking Amino Acid:

EQQTISVAKAGLVCKLNTRT

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

84.7

0.78

0.7

78.2

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

49.9

0.07

1.8

70.61

40.9

Associated Gene:

Gene:

MCM9

Ensembl Gene ID:

ENSAPLG00000015174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015829

65388320 - 65435052

46733

ENSAPLT00000038403

65388320 - 65435207

46888