Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_65439235_65447456_R

Intron Information:

Intron Rank:

149002

Intron Class:

major

Intron Phase:

Intron Coordinates:

65439235 - 65447456

Intron Length:

8222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTACG

5'SS Class:

major

3'SS Sequence:

AATCTGGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CGTGATGCAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.4

41.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

70.8

0.47

65.9

44.5

Minor 5ss

38.2

-1.3

2.7

49.6

40.1

Minor BPS

37.1

-1

2.1

43.42

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030956

65437184 - 65448315

11132