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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6596792_6599498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6596792 - 6599498

Intron Length:

2707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

AGATCTGTAATT

Flanking Amino Acid:

QLASNNHTCVDINECDANNP

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

78.1

36.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

35.7

-1.6

42.9

43.6

Minor BPS

54.6

0.22

71.73

39.6

Associated Gene:

Gene:

EFEMP1

Ensembl Gene ID:

ENSAPLG00000001442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001836

6556824 - 6605540

48717