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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65971881_65976105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65971881 - 65976105

Intron Length:

4225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CTTGTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

CCTAATTTAACT

Flanking Amino Acid:

DVNELDNLLSSTNGFPDPDL

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

77.3

37.6

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

85.9

0.81

0.8

79.9

32.2

Minor 5ss

41.2

-1

2.8

53.2

38.8

Minor BPS

60.8

0.42

1.6

73.22

43.7

Associated Gene:

Gene:

NUS1

Ensembl Gene ID:

ENSAPLG00000015621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016283

65970813 - 65986965

16153