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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66146413_66148868_F


Intron Information:

Intron Rank:
27

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
66146413 - 66148868

Intron Length:
2456

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGTGGGG

5'SS Class:
major

3'SS Sequence:
ATGTCTTTCTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TATTTTTTGATG

Flanking Amino Acid:
AYSTAMQSYPDKSCLIPLLD

Intron Amino Acid Position:
1443

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.8
0.4
1.2
51.5
45.4

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
75.1
0.57
0.8
73.8
36.2

Minor 5ss
27.3
-2.6
3.6
37.8
47

Minor BPS
64.8
0.32
1.2
66.08
36.2

Associated Gene:

Gene:
ROS1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

66109980 - 66185685
75706