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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66167491_66168063_F


Intron Information:

Intron Rank:
40

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
66167491 - 66168063

Intron Length:
573

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAGAAC

5'SS Class:
major

3'SS Sequence:
CCTTACAAATCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTAAC

U12 Branch Point Sequence:
TTTGCCTTACAA

Flanking Amino Acid:
VYLEKMHFIHRDLAARNCLV

Intron Amino Acid Position:
2088

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.9
0.52
1.1
66.5
39

Major BPS
74.5
0.61
1.1
75.6
36.6

Major PPT
62.5
0.28
1
60.4
39.1

Minor 5ss
30.8
-2.2
3.4
42.1
44.9

Minor BPS
62.6
0.39
1.8
76.43
40.8

Associated Gene:

Gene:
ROS1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

66109980 - 66185685
75706