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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66202430_66203708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66202430 - 66203708

Intron Length:

1279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGCG

5'SS Class:

major

3'SS Sequence:

TCTTCCACACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTCTCTTCCACA

Flanking Amino Acid:

AKARNAGSWRDGSFPMSQRS

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

56.7

42.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

67.4

0.39

0.9

60.9

35.1

Minor 5ss

30.8

-2.2

3.2

30.6

42.7

Minor BPS

54.8

0.14

71.01

41.7

Associated Gene:

Gene:

VGLL2

Ensembl Gene ID:

ENSAPLG00000027398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043125

66200901 - 66205790

4890

ENSAPLT00000018616

66201060 - 66205790

4731