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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6627669_6628149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6627669 - 6628149

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTATTA

5'SS Class:

major

3'SS Sequence:

TCCCTTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

TATCCCTTATTC

Flanking Amino Acid:

SALFQRGQTQVLCTVTFDSI

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

70.6

36.1

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

76.9

0.6

0.8

69.6

35.4

Minor 5ss

40.2

-1.1

3.4

48.1

Minor BPS

65.8

0.47

1.6

73.29

37.5

Associated Gene:

Gene:

PNPT1

Ensembl Gene ID:

ENSAPLG00000002885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042722

6622294 - 6637214

14921