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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6628753_6629504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6628753 - 6629504

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTCTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTTTGCTCTATA

Flanking Amino Acid:

KDKNFMLHYEFPPYATNEIG

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

82.6

0.73

0.7

77.3

31.5

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

49.2

-0

2.3

71.4

40.8

Associated Gene:

Gene:

PNPT1

Ensembl Gene ID:

ENSAPLG00000002885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002982

6617846 - 6637214

19369