Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_66313502_66314514_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66313502 - 66314514

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACTAATA

5'SS Class:

major

3'SS Sequence:

CTCCTGTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAATC

Flanking Amino Acid:

GATYAPNASNGYYGNNINYP

Intron Amino Acid Position:

778

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.1

65.1

40.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

65.9

0.36

0.9

61.6

33.7

Minor 5ss

36.5

-1.5

3.3

49.6

46.3

Minor BPS

68.3

0.55

1.4

77.75

32.1

Associated Gene:

Gene:

RFX6

Ensembl Gene ID:

ENSAPLG00000002929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036876

66311311 - 66347855

36545

ENSAPLT00000002959

66311311 - 66347855

36545