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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6631410_6631521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6631410 - 6631521

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTAA

5'SS Class:

major

3'SS Sequence:

CTGTATACATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ACTACTTTAACT

Flanking Amino Acid:

GTNKGITALQVDLKLPGIPI

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.4

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

62.2

0.27

60.8

39.9

Minor 5ss

42.2

-0.9

3.1

55.3

48.9

Minor BPS

75.2

0.87

1.2

82.96

38.2

Associated Gene:

Gene:

PNPT1

Ensembl Gene ID:

ENSAPLG00000002885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045396

6621414 - 6637214

15801

ENSAPLT00000042722

6622294 - 6637214

14921

ENSAPLT00000002982

6617846 - 6637214

19369