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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6631580_6632888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6631580 - 6632888

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCACTGGTA

5'SS Class:

major

3'SS Sequence:

CTAACCTCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAA

U12 Branch Point Sequence:

TTTTCCCTAACC

Flanking Amino Acid:

IKVVMEAIQQAAKREILQIM

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.57

1.2

68.9

Major BPS

52.9

0.07

1.1

59.3

35.9

Major PPT

72.9

0.51

0.9

65.2

35.9

Minor 5ss

21.5

-3.3

4.4

37.7

Minor BPS

81.2

0.96

1.5

91.79

27.2

Associated Gene:

Gene:

PNPT1

Ensembl Gene ID:

ENSAPLG00000002885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045396

6621414 - 6637214

15801

ENSAPLT00000042722

6622294 - 6637214

14921

ENSAPLT00000002982

6617846 - 6637214

19369