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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66317276_66318377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66317276 - 66318377

Intron Length:

1102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACCTGGA

5'SS Class:

major

3'SS Sequence:

TCTCCTCCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAC

U12 Branch Point Sequence:

TTCTCCTCCAAA

Flanking Amino Acid:

NLTLNNASSFGSFHLVRMLL

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.2

56.2

43.1

Major BPS

53.9

0.1

1.2

55.8

37.4

Major PPT

0.29

64.5

29.9

Minor 5ss

36.7

-1.5

3.4

46.8

43.8

Minor BPS

50.2

-0

2.1

68.84

43.3

Associated Gene:

Gene:

RFX6

Ensembl Gene ID:

ENSAPLG00000002929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036876

66311311 - 66347855

36545

ENSAPLT00000002959

66311311 - 66347855

36545