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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66318496_66320841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66318496 - 66320841

Intron Length:

2346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTGTC

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

AATATTTTACTA

Flanking Amino Acid:

DTVVEQRVIKASKQNGRSLK

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

70.7

40.2

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

86.9

0.83

0.7

84.6

30.4

Minor 5ss

41.7

-0.9

3.4

61.2

43.7

Minor BPS

49.7

-0

1.5

58.76

35.1

Associated Gene:

Gene:

RFX6

Ensembl Gene ID:

ENSAPLG00000002929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036876

66311311 - 66347855

36545

ENSAPLT00000002959

66311311 - 66347855

36545