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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66320952_66322249_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66320952 - 66322249

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTACGTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TCCTTTTTACGT

Flanking Amino Acid:

TDSDGEVYSEYDSITVFQEL

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

73.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

69.3

0.43

66.2

40.4

Minor 5ss

36.9

-1.5

2.9

47.3

41.1

Minor BPS

0.01

1.9

65.89

45.8

Associated Gene:

Gene:

RFX6

Ensembl Gene ID:

ENSAPLG00000002929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036876

66311311 - 66347855

36545

ENSAPLT00000002959

66311311 - 66347855

36545