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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66323375_66324199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66323375 - 66324199

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAATG

Flanking Amino Acid:

IPATMQEMPESLLADIRNFA

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

87.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.85

0.7

84.9

29.9

Minor 5ss

37.9

-1.4

3.1

50.4

46.1

Minor BPS

63.9

0.3

1.8

73.83

38.3

Associated Gene:

Gene:

RFX6

Ensembl Gene ID:

ENSAPLG00000002929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036876

66311311 - 66347855

36545

ENSAPLT00000002959

66311311 - 66347855

36545