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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66324250_66325436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66324250 - 66325436

Intron Length:

1187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TACCTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

TTTCTGTTACCT

Flanking Amino Acid:

FCVCDSILYKVLTDVLIPAT

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

30.2

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

73.3

0.52

34.1

Minor 5ss

39.5

-1.2

2.8

48.7

47.5

Minor BPS

52.7

0.16

2.3

80.65

41.4

Associated Gene:

Gene:

RFX6

Ensembl Gene ID:

ENSAPLG00000002929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036876

66311311 - 66347855

36545

ENSAPLT00000002959

66311311 - 66347855

36545