Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_66325551_66325637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66325551 - 66325637

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

CTGGTTCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ATGTCCATGATT

Flanking Amino Acid:

DNAINGNFEEIQHFLLHFWQ

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

75.9

0.58

0.9

73.6

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

62.9

0.49

1.6

78.25

38.2

Associated Gene:

Gene:

RFX6

Ensembl Gene ID:

ENSAPLG00000002929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036876

66311311 - 66347855

36545

ENSAPLT00000002959

66311311 - 66347855

36545