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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66325716_66328205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66325716 - 66328205

Intron Length:

2490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCAAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTCCAAAATA

Flanking Amino Acid:

LLQGCISKDKVDTLIMMYKT

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.1

28.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

67.7

0.4

64.5

35.5

Minor 5ss

-1.2

3.2

55.7

48.5

Minor BPS

63.2

0.41

1.9

80.21

35.9

Associated Gene:

Gene:

RFX6

Ensembl Gene ID:

ENSAPLG00000002929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002959

66311311 - 66347855

36545