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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66325716_66333198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66325716 - 66333198

Intron Length:

7483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCAAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTCCAAAATA

Flanking Amino Acid:

RFSGSKLKNEVDTLIMMYKT

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

81.8

0.79

1.1

34.5

Major PPT

67.7

0.4

64.5

35.5

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

63.2

0.41

1.9

80.21

35.9

Associated Gene:

Gene:

RFX6

Ensembl Gene ID:

ENSAPLG00000002929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036876

66311311 - 66347855

36545