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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6633497_6635342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6633497 - 6635342

Intron Length:

1846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCATTAATA

Flanking Amino Acid:

YNLKKLQAQTGVTLSQLDEE

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

73.7

0.53

78.7

33.2

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

73.1

0.72

1.5

80.44

35.6

Associated Gene:

Gene:

PNPT1

Ensembl Gene ID:

ENSAPLG00000002885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045396

6621414 - 6637214

15801

ENSAPLT00000042722

6622294 - 6637214

14921

ENSAPLT00000002982

6617846 - 6637214

19369