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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6635_7640_F

Intron Information:

Intron Rank:

149697

Intron Class:

major

Intron Phase:

Intron Coordinates:

6635 - 7640

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAAAAT

U12 Branch Point Sequence:

CGGCACTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.7

44.5

Major BPS

55.4

0.14

1.3

61.7

41.5

Major PPT

71.3

0.48

0.9

61.9

Minor 5ss

43.4

-0.7

2.9

58.6

45.9

Minor BPS

44.6

-0.4

1.7

49.29

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043791

6235 - 23278

17044

ENSAPLT00000038117

6235 - 23278

17044

ENSAPLT00000035046

6235 - 16571

10337