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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66375336_66376273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66375336 - 66376273

Intron Length:

938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GGGTTCCGAATT

Flanking Amino Acid:

CPENHYSNQTDMDYCYRCHN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

73.7

30.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

87.4

0.84

0.7

84.9

Minor 5ss

29.1

-2.4

3.4

37.8

Minor BPS

47.6

-0.1

1.8

62.93

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003124

66373621 - 66381349

7729