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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66403845_66403904_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

66403845 - 66403904

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCACTCGGA

5'SS Class:

weak_major

3'SS Sequence:

AAAAAGAGTCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTAGAA

U12 Branch Point Sequence:

AATATTAGAAAA

Flanking Amino Acid:

TTNHNTIQCSIDRYLNCISF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.4

50.8

42.6

Major BPS

61.2

0.28

58.8

38.1

Major PPT

46.9

-0.1

1.1

29.9

40.9

Minor 5ss

26.8

-2.7

4.3

41.1

45.8

Minor BPS

42.6

-0.5

1.6

50.93

32.9

Associated Gene:

Gene:

ZUP1

Ensembl Gene ID:

ENSAPLG00000004367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004512

66403792 - 66411703

7912