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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66406148_66407329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66406148 - 66407329

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

ATTTCTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

ATTGCATTAAGC

Flanking Amino Acid:

GWRLLGAPAADTGNGEQLYE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

57.5

42.3

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

86.6

0.82

0.7

85.6

28.3

Minor 5ss

30.8

-2.2

3.3

32.5

42.6

Minor BPS

55.2

0.14

69.86

41.5

Associated Gene:

Gene:

ZUP1

Ensembl Gene ID:

ENSAPLG00000004367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045711

66405976 - 66414183

8208