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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66410768_66411456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66410768 - 66411456

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

AAATGTTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTATTTTAAAT

Flanking Amino Acid:

IYSLLTSLRIKCQIIDFHKP

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

93.7

19.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.1

0.43

62.1

43.4

Minor 5ss

43.4

-0.7

2.9

60.8

37.6

Minor BPS

70.8

0.73

1.3

85.51

34.3

Associated Gene:

Gene:

ZUP1

Ensembl Gene ID:

ENSAPLG00000004367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004512

66403792 - 66411703

7912

ENSAPLT00000045711

66405976 - 66414183

8208