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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66587484_66609864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66587484 - 66609864

Intron Length:

22381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGGTTGGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

CTCTTATTAACA

Flanking Amino Acid:

TPNQRPFRTLENDEEQEALL

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.9

36.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

71.4

0.48

1.1

61.5

48.6

Minor 5ss

36.2

-1.6

2.7

42.7

38.4

Minor BPS

64.5

0.45

1.6

71.68

40.7

Associated Gene:

Gene:

NT5DC1

Ensembl Gene ID:

ENSAPLG00000010010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033318

66567188 - 66713594

146407

ENSAPLT00000010430

66578884 - 66713594

134711