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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66702818_66706225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66702818 - 66706225

Intron Length:

3408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTGATACTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTCCTTTGATA

Flanking Amino Acid:

CARVVDSLDQHDGQKKYDFW

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

77.1

0.61

0.9

69.8

40.5

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

68.5

0.58

1.1

73.78

Associated Gene:

Gene:

NT5DC1

Ensembl Gene ID:

ENSAPLG00000010010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033318

66567188 - 66713594

146407

ENSAPLT00000010430

66578884 - 66713594

134711