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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66762662_66772579_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
66762662 - 66772579

Intron Length:
9918

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGTGAA

5'SS Class:
strong_major

3'SS Sequence:
GTTGTTGTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTTAT

U12 Branch Point Sequence:
ATAACCTTAGCT

Flanking Amino Acid:
IPVAIKTLRPGSMDPEDFLR

Intron Amino Acid Position:
269

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.2
0.9
0.8
79.4
28.9

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
80.1
0.68
1
76.9
42.1

Minor 5ss
38.1
-1.3
3.1
48.5
47.7

Minor BPS
67
0.61
1.6
80.74
40.3

Associated Gene:

Gene:
FRK

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

66720259 - 66783322
63064