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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6680096_6681042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6680096 - 6681042

Intron Length:

947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTAGTTTAATT

Flanking Amino Acid:

SPLAKTHTSQAILQTVLAAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

82.9

29.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

80.9

0.69

0.7

75.6

26.6

Minor 5ss

55.6

0.19

2.5

75.5

40.6

Minor BPS

60.2

0.4

1.8

77.11

39.8

Associated Gene:

Gene:

CFAP36

Ensembl Gene ID:

ENSAPLG00000026682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019269

6677849 - 6685886

8038