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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6681145_6682038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6681145 - 6682038

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGAAA

U12 Branch Point Sequence:

ATTTTCTTACAG

Flanking Amino Acid:

TEIYQEYQALVEKLLEGYLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

79.6

35.4

Major BPS

53.7

0.09

1.4

64.3

39.6

Major PPT

89.8

0.9

0.7

84.5

30.1

Minor 5ss

-1.1

3.1

54.5

43.9

Minor BPS

58.7

0.13

1.8

66.56

41.1

Associated Gene:

Gene:

CFAP36

Ensembl Gene ID:

ENSAPLG00000026682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019269

6677849 - 6685886

8038