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Intron Name: Anas_platyrhynchos_platyrhynchos_3_66835882_66841772_F

Intron Information:

Intron Rank:

133566

Intron Class:

major

Intron Phase:

Intron Coordinates:

66835882 - 66841772

Intron Length:

5891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTCAATTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ATTGCTTCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.9

38.6

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

83.3

0.75

0.8

80.6

36.5

Minor 5ss

34.5

-1.8

3.3

47.2

Minor BPS

62.1

0.46

1.6

78.23

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040816

66835787 - 66846691

10905