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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6750723_6753325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6750723 - 6753325

Intron Length:

2603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATATTAC

5'SS Class:

major

3'SS Sequence:

GTTGCTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

ATTGTGTTAATT

Flanking Amino Acid:

DIEFYKARVEELKEDNQVLL

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

73.4

31.5

Major BPS

76.9

0.67

66.3

40.4

Major PPT

72.5

0.51

0.9

36.5

Minor 5ss

45.9

-0.4

2.6

60.6

44.5

Minor BPS

55.9

0.26

2.1

77.24

40.1

Associated Gene:

Gene:

CCDC88A

Ensembl Gene ID:

ENSAPLG00000004375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038946

6711854 - 6787795

75942

ENSAPLT00000028128

6711854 - 6776952

65099

ENSAPLT00000004570

6711854 - 6787795

75942

ENSAPLT00000047511

6711854 - 6787795

75942