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Intron Name: Anas_platyrhynchos_platyrhynchos_3_67593226_67596576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67593226 - 67596576

Intron Length:

3351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CATTTTTCATCT

Flanking Amino Acid:

EYFPGTGDLRDIGAGKGKYY

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.4

42.5

Major BPS

100

1.24

0.5

100

Major PPT

77.4

0.62

0.8

72.4

32.4

Minor 5ss

39.9

-1.1

3.3

47.2

48.2

Minor BPS

49.6

0.05

1.8

68.49

42.8

Associated Gene:

Gene:

HDAC2

Ensembl Gene ID:

ENSAPLG00000006926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007252

67587915 - 67604194

16280