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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6772910_6777971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6772910 - 6777971

Intron Length:

5062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

ATTTGCATCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTGCTTTCATT

Flanking Amino Acid:

GQTLGTKKSSTMNDLVQSMV

Intron Amino Acid Position:

1255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

72.2

32.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

72.8

0.51

0.9

63.3

42.3

Minor 5ss

32.4

-2

2.6

36.4

34.8

Minor BPS

0.49

1.8

82.98

39.3

Associated Gene:

Gene:

CCDC88A

Ensembl Gene ID:

ENSAPLG00000004375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047511

6711854 - 6787795

75942