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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6776949_6777971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6776949 - 6777971

Intron Length:

1023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGACTT

5'SS Class:

major

3'SS Sequence:

ATTTGCATCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTGCTTTCATT

Flanking Amino Acid:

KMKAFYRRSMSMNDLVQSMV

Intron Amino Acid Position:

1470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

68.4

42.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

72.8

0.51

0.9

63.3

42.3

Minor 5ss

39.9

-1.1

3.4

58.3

45.6

Minor BPS

0.49

1.8

82.98

39.3

Associated Gene:

Gene:

CCDC88A

Ensembl Gene ID:

ENSAPLG00000004375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038946

6711854 - 6787795

75942

ENSAPLT00000004570

6711854 - 6787795

75942