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Intron Name: Anas_platyrhynchos_platyrhynchos_3_67896948_67934045_F

Intron Information:

Intron Rank:

134108

Intron Class:

major

Intron Phase:

Intron Coordinates:

67896948 - 67934045

Intron Length:

37098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

TTTGGTTTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

62.6

0.31

59.1

37.6

Major PPT

86.8

0.83

0.8

84.8

35.6

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

46.1

-0.2

2.3

70.73

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047578

67889531 - 67961488

71958