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Intron Name: Anas_platyrhynchos_platyrhynchos_3_68642451_68645023_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

68642451 - 68645023

Intron Length:

2573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGCACTGA

5'SS Class:

weak_major

3'SS Sequence:

GGTTTATTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TCTTGCTCACAT

Flanking Amino Acid:

LPSLKKLSSWGNQASSKGLL

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.7

0.14

1.1

46.4

40.5

Major BPS

85.7

0.89

0.8

22.2

Major PPT

71.6

0.49

0.9

65.6

40.1

Minor 5ss

35.6

-1.6

3.2

38.1

46.8

Minor BPS

-0.2

2.3

69.15

47.4

Associated Gene:

Gene:

LAMA4

Ensembl Gene ID:

ENSAPLG00000013937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014625

68615641 - 68691491

75851