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Intron Name: Anas_platyrhynchos_platyrhynchos_3_68645136_68648176_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68645136 - 68648176

Intron Length:

3041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTGAC

U12 Branch Point Sequence:

TTTTTTCCCACA

Flanking Amino Acid:

QLHNMKDNIQEISSKMKYYA

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.4

34.2

Major BPS

60.9

0.27

1.2

55.1

42.1

Major PPT

88.7

0.87

0.6

84.5

23.5

Minor 5ss

34.4

-1.8

2.8

42.8

Minor BPS

45.8

-0.3

2.2

67.52

39.2

Associated Gene:

Gene:

LAMA4

Ensembl Gene ID:

ENSAPLG00000013937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014625

68615641 - 68691491

75851