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Intron Name: Anas_platyrhynchos_platyrhynchos_3_68648345_68649080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68648345 - 68649080

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TATGGATTAATC

Flanking Amino Acid:

AAEEEDAAEDLLQRVEEFHE

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

0.6

1.2

75.9

36.3

Major PPT

93.7

0.98

0.6

88.2

29.1

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

49.2

-0

2.1

64.46

41.3

Associated Gene:

Gene:

LAMA4

Ensembl Gene ID:

ENSAPLG00000013937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014625

68615641 - 68691491

75851