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Intron Name: Anas_platyrhynchos_platyrhynchos_3_68651539_68653569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68651539 - 68653569

Intron Length:

2031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTGTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CTTCCTTGTATA

Flanking Amino Acid:

INSELSEVIKNVSGFYAEID

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

78.9

0.65

77.6

40.8

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

48.1

-0.1

1.8

61.09

39.6

Associated Gene:

Gene:

LAMA4

Ensembl Gene ID:

ENSAPLG00000013937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014625

68615641 - 68691491

75851