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Intron Name: Anas_platyrhynchos_platyrhynchos_3_68656013_68657074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68656013 - 68657074

Intron Length:

1062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

AACATACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTTTGGAACA

Flanking Amino Acid:

ALNTTNRVNDAAVGIDTQVI

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

67.8

0.4

59.2

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

54.7

0.14

2.1

75.34

36.3

Associated Gene:

Gene:

LAMA4

Ensembl Gene ID:

ENSAPLG00000013937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014625

68615641 - 68691491

75851