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Intron Name: Anas_platyrhynchos_platyrhynchos_3_68682686_68683509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68682686 - 68683509

Intron Length:

824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

ATCTTCCAAATA

Flanking Amino Acid:

EKYNDGLWHNVIFIRGKNIG

Intron Amino Acid Position:

1367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

80.3

0.68

0.8

72.8

37.5

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

-0.1

1.9

61.46

39.3

Associated Gene:

Gene:

LAMA4

Ensembl Gene ID:

ENSAPLG00000013937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014625

68615641 - 68691491

75851